PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014842.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 172aa    MW: 19659.4 Da    PI: 10.5301
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014842.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.21.9e-17124159235
         GATA   2 s..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  +  nC++tk+p+WR+gp g+k+LCn CG++yrk+++
  PCP014842.1 124 TnfNCRVTKSPMWRKGPLGPKSLCNRCGIRYRKMKM 159
                  5559*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MDFGGVHRSQ LMNFAPQNQF NMEGTGSGLD LTLRLGLSSN NHGGDHFRPY LNEALPRASN  60
QFRFNYTNPA VGTTSKAYNV PKPPKPDDYC DIDITNKTSR TGGSRKRNLT KVRTVKPDEN  120
LICTNFNCRV TKSPMWRKGP LGPKSLCNRC GIRYRKMKMK EEMEKKEREQ LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.12e-12GATA family protein