PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014862.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 568aa MW: 62114 Da PI: 6.9489

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014862.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.8	1.1e-09	385	432	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P++ +k Ka +L + ++Y++sLq PCP014862.1 385 SHSLAERVRREKISERMKLLQDLVPNC----NKVTGKALMLDEIINYVQSLQ 432 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MENDFFLNAG IPPPLHFEQA SSMPAWRSSF STAIDIQSST ADRNYSLEQS PDCFYNPNWV 60 NKSTDQNIHF ESALSPMLSS PAASNSNISN ESFVIRELIG KLGNIRGSGE ISPHSESLLG 120 IQNSYMGRNG NVSANTSCYS TPLNSPPKLN LPVADHHWKK EKLPSLGNSM ALKSSVAEFS 180 ADPGFAERAA KFSCFGSRSF NGRTPQLGMN NNNSTEQPPF RSHPAAKNGD KFPRVSSSPS 240 LKALGSQTSM QEMMSALLQD RSEFPISREE STISEQNPNG ETNSMDLNSR KRKSVSKGKA 300 KDPPPPISPS PTSTKGTEAN ENSNAKRSKP SENNGNDQNG SVKAEEDAKG STSSDEKQTK 360 TGPKPSEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPN CNKVTGKALM 420 LDEIINYVQS LQRQVEFLSM KLSSVNTRLD FNMETLMSKE IFQQNSGLPQ HPIFPSDSSA 480 QAICGHQRQQ NPALCNGAVD PLDNTSLCQG LGMQLPPLSG FSSERIPQFA AFGEDDLQTI 540 VQMGFGQNPT SESELHGSNQ VSHMKIEL

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MENDFFLNAG IPPPLHFEQA SSMPAWRSSF STAIDIQSST ADRNYSLEQS PDCFYNPNWV  60
NKSTDQNIHF ESALSPMLSS PAASNSNISN ESFVIRELIG KLGNIRGSGE ISPHSESLLG  120
IQNSYMGRNG NVSANTSCYS TPLNSPPKLN LPVADHHWKK EKLPSLGNSM ALKSSVAEFS  180
ADPGFAERAA KFSCFGSRSF NGRTPQLGMN NNNSTEQPPF RSHPAAKNGD KFPRVSSSPS  240
LKALGSQTSM QEMMSALLQD RSEFPISREE STISEQNPNG ETNSMDLNSR KRKSVSKGKA  300
KDPPPPISPS PTSTKGTEAN ENSNAKRSKP SENNGNDQNG SVKAEEDAKG STSSDEKQTK  360
TGPKPSEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPN CNKVTGKALM  420
LDEIINYVQS LQRQVEFLSM KLSSVNTRLD FNMETLMSKE IFQQNSGLPQ HPIFPSDSSA  480
QAICGHQRQQ NPALCNGAVD PLDNTSLCQG LGMQLPPLSG FSSERIPQFA AFGEDDLQTI  540
VQMGFGQNPT SESELHGSNQ VSHMKIEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	294	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-109	bHLH family protein