PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014964.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 234aa    MW: 25798.7 Da    PI: 10.0032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014964.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.1e-135096354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++h+e+ErrRR+riN  +++Lr+llP+      ++ +Ka+ L ++v+++++L
  PCP014964.1 50 TSHKEAERRRRQRINAHLSTLRTLLPNT-----TRTDKASLLAEVVQHVREL 96
                 79*************************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MLPFQNYSES ERQSWSSQNR NNNNLMDGAD SILSSAASAT ETAKSAEAST SHKEAERRRR  60
QRINAHLSTL RTLLPNTTRT DKASLLAEVV QHVRELRRQA DDLAGQGRAG SEAWPFPGES  120
DEVTLNYCNG GTKLLKATLS CEDRPGLNRD LVQAIRSVRA RTVRAEMMTV GSRTKNVVVM  180
QWAGGGGEEG FRALKRALKA VVENRTSGSR LGKLVSGNNR GRVYEDADED MSLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.14e-24bHLH family protein