PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015035.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ARR-B
Protein Properties Length: 704aa    MW: 78374.7 Da    PI: 6.8788
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015035.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.72.6e-28204257155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  PCP015035.1 204 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 257
                  79*******************.********************************8 PP
2Myb_DNA-binding38.92.1e-12206256148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
      PCP015035.1 206 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 256
                      678********************************99*************7 PP
3Response_reg77.16.3e-26201281109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ ++ll+ +l++ +y +v++++++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +g+ +++ + +  Ga 
   PCP015035.1  20 VLAVDDDPICLKLLEALLRRCQY-HVTTTSQAITALKLLRENKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGDHKLVMKGITHGAC 114
                   799********************.***************888888*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e+l +
   PCP015035.1 115 DYLLKPVRIEQLKN 128
                   ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MTVERVLDEP RDQFPIGMRV LAVDDDPICL KLLEALLRRC QYHVTTTSQA ITALKLLREN  60
KDKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSVNG DHKLVMKGIT HGACDYLLKP  120
VRIEQLKNIW QHVIRKKVDS KDQNSGNQDK SHAGSGEGGL GSVGMGNSDQ NAKLNKKRKD  180
QNEGEDEDHD EDEYENDDPS TQKKPRVVWS VELHRKFVAA VNQLGIDKAV PKKILDLMNV  240
EKLTRENVAS HLQKYRLYLK RISCVANQQA NMVAALGTSD SSYLRTASMN GVGNYHALTG  300
PVQFHNNGYR SYPPNGMIGR LNTPAGVGLH CLPSSGMFQL GHAQNPSNSI NDQPVMFPGN  360
RRGNMLPAHL ELDQQHSRGS AYDAPIYPNS SGFTDGKVMN RSNDPFSLTD DTLLRHNQDS  420
EVGRNHVILQ SSVSMTSLKP ELSPSFLDHR RLNDNWPTAA QSSAFRSNSF SAHDTFKQPT  480
LLVSNLRDDM PIMSSQIGSS QIDVSCINSI SCQSQDSRIE MQIPASTMSN NSGPTINNDL  540
FMGWDEPKQD SPFRPDVMCS SMNNLRPVND NVAPFDQNLD ARSSAFLRNS DFNSIGQPNF  600
LDVEISTMDA PLKLKQQGYL MDQRKPQGGY VPHNAGSLDE LVSSMMKQLL GTLLAHLIAI  660
NILVKGDKAK SPEGWFNPCV VYSLRSRRCS SYLSSYLINL KFCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-130ARR-B family protein