PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015082.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 324aa    MW: 35331.8 Da    PI: 8.6508
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015082.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding377.9e-1260104147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +W++ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
      PCP015082.1  60 RESWSEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 104
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MVSKNPNLPE GLYLDPDVNG MALPGLGPFA PVTATASTTS SSAEDLSKKI RKPYTITKSR  60
ESWSEPEHDK FLEALQLFDR DWKKIEAFIG SKTVIQIRSH AQKYFLKVQK NGTSEHLPPP  120
RPKRKAAHPY PQKASKNALA LPPVSGSCLS SSALLESGFN QRPDSSSMLM SPIPGPVAPS  180
WTNGSVQSAN PSHESKGVSG PATVPNNSCS TTESTPKAQP VGGTTDQVNH SHALRVLPDF  240
TQVYGFIGSV FDPNVTGHMQ SLKKMDPIDV ETVLLLMRNL SMNLTNPDFE DHRQLLSSYK  300
MDADTGNLSD ETKSRRDNQH EKVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-103MYB_related family protein