PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015193.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 271aa    MW: 29573.4 Da    PI: 5.4223
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015193.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-1888137255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   ++GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  PCP015193.1  88 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYQTAEMAARAHDVAALAIKG 137
                  59****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MANQINIESD AQENLLTTTT TSSSSSSSSS SSTITNSHSL ADHKSTRVSL SENCTPKKGQ  60
EPNNEKEQGN NKKRRRTTSD DSNGKHPTFR GVRMRSWGKW VSEIREPRKK SRIWLGTYQT  120
AEMAARAHDV AALAIKGASA YLNFPELAQA LPQPNSKSPK DIQAAAAKAA AEAASASASE  180
EKQLICEAET KEAEAKLPMS AHSTLSNAQE SSSTCASAST DYDEEQLFDL PDLVMDGKDG  240
SDNFCYYSSS TWHLCAADTG FRLEEPFLWE Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-67ERF family protein