PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015205.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 250aa    MW: 27327.3 Da    PI: 5.395
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015205.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-2951109259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ +p+++++tY  +Hnh+
  PCP015205.1  51 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLNPTMLIVTYVCDHNHP 109
                  69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEDSPSSASE DDTKVATPLP KKRRGVQKRV VSVPIGDVEG SKSKGEGHPP SDSWAWRKYG  60
QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRLNPTMLIV TYVCDHNHPM PTTKANQSSS  120
VTTTTTTTTA TSPTTESELP AKTEELTVFT SQVDLDLSDD SPTLLSDFGW FNDASSTVVL  180
ESPICLGNSS CMNNDVATRL KDEDEYLFAD LGELPEGSVI FRHRNRMVES DDQNARCSLS  240
AVVSYCSNTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.25e-68WRKY family protein