PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015238.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 285aa    MW: 30807.1 Da    PI: 5.3631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015238.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182373256
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                 ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  PCP015238.1 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                 689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGLREQNDGV RKRKKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSNGAGNG GAGVAENVPF SFEAVCGNEV EAEGLLGALR  120
AKLQDGKVIN RVLPQPPQGN SGTKVEPSPV DPRGAVTETV NPRPPHMENP IVLDNQWQLQ  180
VHPAPSNQTM VWANESQVAY EQVQNWSTWP NNSMPYVPEQ CSMELPLPAV GTQLLSQIDG  240
SAGGGDGGDG GWCSDQQQFL HCDGSNWGGA NANWDPPFYA SSVLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11115RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16ERF family protein