PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015294.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 344aa    MW: 38022.3 Da    PI: 9.2021
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015294.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.7e-13272317655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+Lq
  PCP015294.1 272 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 317
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MYNGPPASNS TLTSLIQIST VASSAPPFMD SNTHQHNSGF LRFRSAPRSL LPNFADGGDS  60
GLHSKNPIQG SSESERLFSR FANYCHTNDS DSWPSSFQEF DDKSVVTSTE AAVSAIRMSS  120
QGGYSGLLPP HYPRQSSFNG GYGLAGSGPM ERHHTPANKS VHSNSNLVRQ SSSPAGLFSN  180
TSLQNGFPFG TWNDSSNFPE NLGGMRRDQD HNGKLFSVDQ NGELENRFHV LSHHLSLPKT  240
SAEIAMEKFL QLQDSVPCKV RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT  300
NTADMLDLAV DYIKDLQKQF KTLSDVRANC KCLNMQKPVS NQVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-97bHLH family protein