PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015304.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 201aa MW: 22381.6 Da PI: 4.5072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015304.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	41	77	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRR+++ ++ Lr l+ +Ka+i+e A+ YI++Lq PCP015304.1 41 AERRRREKLSGRLLALRALM-----------NKATIVEDAITYIQELQ 77 79999999999999999987...........5569************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MNSVSCVLDE LCLAEEEGSG GGRMSFKSKT DGEFKSKNLF AERRRREKLS GRLLALRALM 60 NKATIVEDAI TYIQELQQKV NLLKDQIFEM EASSEETLEP NTEETHPDAA EEMKIFGIQT 120 EVNVTKIDGN KLWVKAVLEK KRGGFTKLMG AMTAFGFELT DTSITTSSGA MMVSSCVTGF 180 SCETLEVEQT RELMLEIIND I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	47	ERRRRE
2	43	48	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21330.1	7e-42	bHLH family protein