PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015368.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 248aa    MW: 27392.3 Da    PI: 8.6679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015368.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67e-1191138454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RR+r+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  PCP015368.1  91 SKACREKLRRERLNDKFVELGSILEPG---RPPKTDKAAILVDAVRMVNQL 138
                  5678**********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVSPENTNWL FDYGLIDDTP VLDGNFTWPV QPNAGSASVR LGHVVWLLIY FLYSVAFPSV  60
ELDGSLGDAE ALKESGSKKR VRSESCSGTS SKACREKLRR ERLNDKFVEL GSILEPGRPP  120
KTDKAAILVD AVRMVNQLRG EAQKLKDTNS GLQEKIKELK TEKNELRDEK QRLKSEKEKL  180
EQQLKSMNAQ PGFLPPPPGI PAAFAAQGQA HGNKLVPFIG YPGVAMWQFM PPAAVDTSQD  240
HVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-85bHLH family protein