PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015665.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 1067aa MW: 119247 Da PI: 7.3473

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015665.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.6	2e-07	785	816	20	55
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f+ Lr+++P++ ++K +Ka+ L +++eYI+ Lq PCP015665.1 785 FQMLRDIIPQN----DQKRDKASLLLEVIEYIQFLQ 816 999*****9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1067 aa Download sequence
MYRRLWGPVR HLESLQPNAN PRGHYAEPDS DTSGFIFVRI QGGFHEIRNS ICDVVVVSRF 60 LNATLVIPEI QSTTSSKGIS SQFKSFAYLY NEDQFMAALS KDVKVVKMLP QNLKGQRRKK 120 NIPVFKVPYS ASPYYYKNNV LPILKKHLVV ELVVSDGGCL QAILPPDLEE YQRLRCRVAF 180 HALRFRQEVQ ELATEILQRL KAPGQPFIAF DPGMTREALA YHGCAELFQD VHTELIQHKR 240 QWMIKRGIVK GKLSVNSAKQ RLKGSCPLMP EEIGIILRAY GYLWDTIIYV SGGEIFGGQR 300 TLIPLRAMFE NVVDRTSLSM PWELSRMYGR EANLVDRNPR SPPVIEEEMK IEAWKNAGPR 360 PRPLPPPPAR PKSYNIEGWW GWVAESDNEP DSTVIELRTN AHKLLWEAID YVICVEADVF 420 IPGFDFDGKG HPNFASLVMG HRLYQSAESK TYRPDRKEVA KLLDEIHDHL YHANHTWLMS 480 VRKHLRKRLV DGLIEASARS KPLSFISHPV PECSCLRQDP AGKSINATSS PHASTPSHSQ 540 VLSALGVVHY CPAWMESDLT LQSKPKDKEN EETLEEDDST SSGLFFRKNN GDHDGGNGDI 600 SNKEETQLED QEELEGGERK SVGSQKLLRN MGDMGQNLSS KNTKLYKSKD RSPSSSNKTR 660 KNNNLISSLP SLLNIIHFLL LLQFESLFSD QVKIRIMSKN TASSFMSLLG LLSRCFGGET 720 MRSRSGRRED GPEAWNVAAA KHFSSAQKPE MAKPSKGHHD EFEDDDEVSH GVFPPILFSC 780 SFRLFQMLRD IIPQNDQKRD KASLLLEVIE YIQFLQEKVN LYEGSYQGWS PEPTKLVPWR 840 LTDLPFICLP QKGHNRSGEN FADQSQVMND GSGHENNVIV SPAMLPNSQN SVESNLGSAV 900 AYKALDHIAG LATQSVPNVQ QQGIFDSVGS GVPTQPLQES ITDAQNMACQ PQFPLWAGVT 960 SSTVSDGKLN KQDEHSGSGS TSSAYSQGVL NNLTQALQSA GLDLSLASIS VQMDVVNRAD 1020 SGLTSVASSS KAHVNQSMNN QMMTQAQVSS CDGGLELAHK RFRTRES

Sequence ? help Back to Top

Protein Sequence Length: 1067 aa Download sequence

MYRRLWGPVR HLESLQPNAN PRGHYAEPDS DTSGFIFVRI QGGFHEIRNS ICDVVVVSRF  60
LNATLVIPEI QSTTSSKGIS SQFKSFAYLY NEDQFMAALS KDVKVVKMLP QNLKGQRRKK  120
NIPVFKVPYS ASPYYYKNNV LPILKKHLVV ELVVSDGGCL QAILPPDLEE YQRLRCRVAF  180
HALRFRQEVQ ELATEILQRL KAPGQPFIAF DPGMTREALA YHGCAELFQD VHTELIQHKR  240
QWMIKRGIVK GKLSVNSAKQ RLKGSCPLMP EEIGIILRAY GYLWDTIIYV SGGEIFGGQR  300
TLIPLRAMFE NVVDRTSLSM PWELSRMYGR EANLVDRNPR SPPVIEEEMK IEAWKNAGPR  360
PRPLPPPPAR PKSYNIEGWW GWVAESDNEP DSTVIELRTN AHKLLWEAID YVICVEADVF  420
IPGFDFDGKG HPNFASLVMG HRLYQSAESK TYRPDRKEVA KLLDEIHDHL YHANHTWLMS  480
VRKHLRKRLV DGLIEASARS KPLSFISHPV PECSCLRQDP AGKSINATSS PHASTPSHSQ  540
VLSALGVVHY CPAWMESDLT LQSKPKDKEN EETLEEDDST SSGLFFRKNN GDHDGGNGDI  600
SNKEETQLED QEELEGGERK SVGSQKLLRN MGDMGQNLSS KNTKLYKSKD RSPSSSNKTR  660
KNNNLISSLP SLLNIIHFLL LLQFESLFSD QVKIRIMSKN TASSFMSLLG LLSRCFGGET  720
MRSRSGRRED GPEAWNVAAA KHFSSAQKPE MAKPSKGHHD EFEDDDEVSH GVFPPILFSC  780
SFRLFQMLRD IIPQNDQKRD KASLLLEVIE YIQFLQEKVN LYEGSYQGWS PEPTKLVPWR  840
LTDLPFICLP QKGHNRSGEN FADQSQVMND GSGHENNVIV SPAMLPNSQN SVESNLGSAV  900
AYKALDHIAG LATQSVPNVQ QQGIFDSVGS GVPTQPLQES ITDAQNMACQ PQFPLWAGVT  960
SSTVSDGKLN KQDEHSGSGS TSSAYSQGVL NNLTQALQSA GLDLSLASIS VQMDVVNRAD  1020
SGLTSVASSS KAHVNQSMNN QMMTQAQVSS CDGGLELAHK RFRTRES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	4e-36	bHLH family protein