PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015699.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 698aa MW: 76859.7 Da PI: 4.2898

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015699.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	27.2	1.1e-08	3	50	3	51
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51 + +rFhPtd+e+ ++L kk++++k ++ ++++ +d+yk+eP+ Lp+ + PCP015699.1 3 AAIRFHPTDKEMA-DFLGKKMRSHKSQACHFLPVIDVYKSEPRALPELM 50 678******99.9******999999************9532 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MMAAIRFHPT DKEMADFLGK KMRSHKSQAC HFLPVIDVYK SEPRALPELM FADSAFQAKA 60 CKPKQGSSPC QERDVKRDYV LCLLKYKPVY SMSDKKKPEG TSVCDDLADL DNCGYIASSP 120 GDDHAASAAA MNHMTPDTEV LTYKELEDDL LGNGNHDHGE PGGGVSSDSI DQALRDMIHE 180 SYAPLGGFLD LLFPPPEPPQ PHQPHQPHQP PQLGNAPDIY SHELVDPGSG TGGCIPYNFD 240 DQAAAMNHMV PNTEEILADK QPERAVLGSG DHDDGEPGIG ISSHFNYQAV DDMTLEFYDQ 300 LEKDLDSPVS PPDPPQPHQL GNFPDVHIGE FSNWPSTIGD NDSYDIIKNN IATNYDNEPV 360 VNIAYNSQNL ATNERISEAY SQPEENRGSP LQQFDQLQNY TLQSCASAGE YLNSLFPLPQ 420 SPRPHQPPQL GNAPDVCSDE SIDPGIGGCV TYNTDNQAAA MNHVISDTEE ILTYKQLELA 480 VLGNGNHGDG EPSSGISSYF IDQALNDVIL EFPAGLQKDL DSPFPPPEPP QTHQQHQLGD 540 VPDAHSSEFS NCPSPIGDNG FYRTNKNNIA TNYDNEQVIN IAYNSPNCAA NERISEAYSQ 600 PEENRGSPFQ PFDQLQNYPL QSPILFSELG ELLLANTYIP QTTAISTNIH SCLPPWRCSK 660 TDPNAEQFQE TRTVKLQLAH CIAVCSYRLK QAWNAQRI

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MMAAIRFHPT DKEMADFLGK KMRSHKSQAC HFLPVIDVYK SEPRALPELM FADSAFQAKA  60
CKPKQGSSPC QERDVKRDYV LCLLKYKPVY SMSDKKKPEG TSVCDDLADL DNCGYIASSP  120
GDDHAASAAA MNHMTPDTEV LTYKELEDDL LGNGNHDHGE PGGGVSSDSI DQALRDMIHE  180
SYAPLGGFLD LLFPPPEPPQ PHQPHQPHQP PQLGNAPDIY SHELVDPGSG TGGCIPYNFD  240
DQAAAMNHMV PNTEEILADK QPERAVLGSG DHDDGEPGIG ISSHFNYQAV DDMTLEFYDQ  300
LEKDLDSPVS PPDPPQPHQL GNFPDVHIGE FSNWPSTIGD NDSYDIIKNN IATNYDNEPV  360
VNIAYNSQNL ATNERISEAY SQPEENRGSP LQQFDQLQNY TLQSCASAGE YLNSLFPLPQ  420
SPRPHQPPQL GNAPDVCSDE SIDPGIGGCV TYNTDNQAAA MNHVISDTEE ILTYKQLELA  480
VLGNGNHGDG EPSSGISSYF IDQALNDVIL EFPAGLQKDL DSPFPPPEPP QTHQQHQLGD  540
VPDAHSSEFS NCPSPIGDNG FYRTNKNNIA TNYDNEQVIN IAYNSPNCAA NERISEAYSQ  600
PEENRGSPFQ PFDQLQNYPL QSPILFSELG ELLLANTYIP QTTAISTNIH SCLPPWRCSK  660
TDPNAEQFQE TRTVKLQLAH CIAVCSYRLK QAWNAQRI