PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015700.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 573aa MW: 63822.8 Da PI: 5.5243

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015700.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.2	6.9e-36	27	144	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 pGfrF Ptde lv++yL+kk+eg++ ++ ++i+e+d+ k++P dLp +fFs+ d kya+++r nrat++g+ k tgk+++++++ ++++ PCP015700.1 27 PGFRFYPTDESLVSYYLRKKIEGTESRFRHFIREIDVSKYDPGDLP---------EFFFSRPDYKYANSTRCNRATDEGFYKITGKERAIKAEwSKAV 115 9*************************999**********9.........49*******************************988899 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tL+fy gr ++++ktdW++hey l PCP015700.1 116 IGMKRTLTFYLGRVSNATKTDWILHEYYL 144 *************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MSSSSSNRSG MTAEEGDAVS VNVIPLPGFR FYPTDESLVS YYLRKKIEGT ESRFRHFIRE 60 IDVSKYDPGD LPEFFFSRPD YKYANSTRCN RATDEGFYKI TGKERAIKAE WSKAVIGMKR 120 TLTFYLGRVS NATKTDWILH EYYLTETEVG SKPTKRMEFV ICRLRNKSAG YKEPKVDSIG 180 GELADSGANS EEDRDAVSDV IAAPVEHLGS KEPGDVNRSE SPDGSCPMDC NGILTVDGDD 240 ETGGWKFNDS DDPVASDMVR ELCAEGEVPN SPSQPLQPPQ TPQTYQTLPP YQPQDYCPST 300 LQPLQSPQPH QPPQSPQPHQ PPQPHQPQDY RPSTLQPLQS PQPHQPQDYC PYTLQQPLHT 360 RHGIDPNVYG DCTKRQSLIP DNSSSPEYKN SISTNDRYEQ VSKLANGVQD RATDERISEV 420 REAAEYCIAP YLPWKKTKTE SWKHTVLKQA TIGFFHRSIS SKPSIKSPMG NGSAATWLLG 480 SQIYYNDQTL MVMSWLLMGV GDVRWQRRGG DCGGGVGRSR NRGGGDDGGS DDSVGQDHSR 540 VGKYAHEDGN GWATVTVVAV DVKVEEMVMV KGW

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MSSSSSNRSG MTAEEGDAVS VNVIPLPGFR FYPTDESLVS YYLRKKIEGT ESRFRHFIRE  60
IDVSKYDPGD LPEFFFSRPD YKYANSTRCN RATDEGFYKI TGKERAIKAE WSKAVIGMKR  120
TLTFYLGRVS NATKTDWILH EYYLTETEVG SKPTKRMEFV ICRLRNKSAG YKEPKVDSIG  180
GELADSGANS EEDRDAVSDV IAAPVEHLGS KEPGDVNRSE SPDGSCPMDC NGILTVDGDD  240
ETGGWKFNDS DDPVASDMVR ELCAEGEVPN SPSQPLQPPQ TPQTYQTLPP YQPQDYCPST  300
LQPLQSPQPH QPPQSPQPHQ PPQPHQPQDY RPSTLQPLQS PQPHQPQDYC PYTLQQPLHT  360
RHGIDPNVYG DCTKRQSLIP DNSSSPEYKN SISTNDRYEQ VSKLANGVQD RATDERISEV  420
REAAEYCIAP YLPWKKTKTE SWKHTVLKQA TIGFFHRSIS SKPSIKSPMG NGSAATWLLG  480
SQIYYNDQTL MVMSWLLMGV GDVRWQRRGG DCGGGVGRSR NRGGGDDGGS DDSVGQDHSR  540
VGKYAHEDGN GWATVTVVAV DVKVEEMVMV KGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	6e-36	NAC family protein