PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015800.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 354aa MW: 40481.6 Da PI: 8.1186

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015800.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.6e-50	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lp+GfrFhP+deel+v+yLk+kv++ +l++ ++i+e+d+yk++Pw+Lp k++ +e+ewyfF++rd+ky++g+r+nra+ gyWkatg+dk+++s+ ++ PCP015800.1 13 LPAGFRFHPSDEELIVHYLKNKVTSCPLPA-TIITELDLYKYNPWELPPKASFGEEEWYFFTPRDRKYPNGSRPNRAAGLGYWKATGTDKHIFSScGT 109 799*************************.89**********97778899***********************************9888 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g+kk Lvfy+g+ pkg+kt+W+m+eyrl PCP015800.1 110 KSIGVKKALVFYTGHPPKGVKTEWIMNEYRL 140 89*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MERENQATEN IQLPAGFRFH PSDEELIVHY LKNKVTSCPL PATIITELDL YKYNPWELPP 60 KASFGEEEWY FFTPRDRKYP NGSRPNRAAG LGYWKATGTD KHIFSSCGTK SIGVKKALVF 120 YTGHPPKGVK TEWIMNEYRL LDTTMWTSKQ KGSMRLDDWV LCRVRQKCNN TRSIWEDQNS 180 PPSYKLGAYT KQVDEPCSND TNPSIEMVRN YLYKDCPMLP YIFASPELPY AKITSSISFQ 240 GTGNTKSCST SLHETNSNKT NELLLVSSRD DLINPLKRKP TEGNGYKSFV TPSKRICSRD 300 YKEEEVNSST SRDCRAMNLW GVDQSGSADN NLNADQWSSM IQYQELSQLI GFQV

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MERENQATEN IQLPAGFRFH PSDEELIVHY LKNKVTSCPL PATIITELDL YKYNPWELPP  60
KASFGEEEWY FFTPRDRKYP NGSRPNRAAG LGYWKATGTD KHIFSSCGTK SIGVKKALVF  120
YTGHPPKGVK TEWIMNEYRL LDTTMWTSKQ KGSMRLDDWV LCRVRQKCNN TRSIWEDQNS  180
PPSYKLGAYT KQVDEPCSND TNPSIEMVRN YLYKDCPMLP YIFASPELPY AKITSSISFQ  240
GTGNTKSCST SLHETNSNKT NELLLVSSRD DLINPLKRKP TEGNGYKSFV TPSKRICSRD  300
YKEEEVNSST SRDCRAMNLW GVDQSGSADN NLNADQWSSM IQYQELSQLI GFQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-79	NAC family protein