PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015845.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 266aa    MW: 29055 Da    PI: 6.2495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015845.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-1788136355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  PCP015845.1  88 YCGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 136
                  66***998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MANQINIESD AQENLLHSTS TSSSTSSSST ITTNFNSLAD HKTTQVSLNL DNCTSKKGQN  60
PNNKKEQGNK KKRQRTTSDH SDGKHPTYCG VRMRSWGKWV SEIREPRKKS RIWLGTYPTA  120
EMAARAHDVA ALAIKGASAY LNFPELAQAL PQPDSKSPKD IQAAAAKAAA ASASEEKQLI  180
CEAETKEAEP KLPISTNSTL SNAQESSSTC ASGSTDYDDE KLFDLPDLFM DGKEGSDIFC  240
NYSSSTWHLC AADTGFRLGD PFLWEY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17075KKKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.18e-66ERF family protein