PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015885.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 265aa    MW: 29421.1 Da    PI: 8.9706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015885.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.6e-21135184255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++g
  PCP015885.1 135 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFTTAEEAARAYDKAAIEFRG 184
                  59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MQPSYKRFKP SDSQPAHSAP PPFQPSPPPP RLTQDQEYTV IVSALRNVVA GTATAASVDL  60
NSLLPPLQRA ATFSPRYTTS TSCSSNTLLV PSDLDTCDVC KIKGCLGCTL FPPAAQEEKG  120
SSSNKRGPKK RVKKNYRGVR QRPWGKWAAE IRDPRRATRV WLGTFTTAEE AARAYDKAAI  180
EFRGPRAKLN FPFPDTTLVT QESNSSQPQQ QQVVTEQRNK NVEFSGEVET TGIMKENELL  240
EEDFQQWMMM LDATNNSSDS GNVHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.16e-33ERF family protein