PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015886.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 287aa    MW: 31220.5 Da    PI: 8.8315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015886.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.5e-201565256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  PCP015886.1 15 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 65
                 589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MLAKSPSNTK TALRRFVGVR QRPSGRWVAE IKDSSQRVRL WLGTYDTPEE AARAYDEAAR  60
ALRGENARTN FAPPGPATNP NSCPLVSCAS NGGFVSGSDG RHAGAGLSFS SLKAKLSKNL  120
QSIMARSSDR NKSSKSRVSD HFTFASIFHF RKYQYQNTVN PLTDMRNIEK VVQPSIIVPH  180
NNGKTSTSTE PSSWENSSIS DCSAEWAHGF QQVGVDSEGS EIGEGSIMDQ IMGWMDSPDN  240
QIGRISLGDD SEEGSRSKRF KVSSSVMVPP TFSTGSPFNN NEGEVSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-17ERF family protein