PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015919.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 358aa    MW: 39705.2 Da    PI: 6.6778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015919.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-09186233455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k    a +L + ++Y++sLq
  PCP015919.1 186 SHSLAERVRRQKISERMKMLQRLVPGC----DKITGRAVMLDEIINYVQSLQ 233
                  8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAAFSYQNPH HPSLLDSIFL PNSPTTNNIN TDSKFSQSFY PSEPLTQEIQ ADNNSRAVES  60
SCTMDHSSTK AAFSDNENDP SVTKNKSTES SIVVDVDRLE IGDQVTQKVT PMGKKRKSRT  120
GSSFNSAQSK GTKEQKGKKQ KKIDGGTKKD EEKKIKSDEE DQVKAREGPP TGYIHVRARR  180
GQATDSHSLA ERVRRQKISE RMKMLQRLVP GCDKITGRAV MLDEIINYVQ SLQNQVEFLS  240
MKLDSSNPMF YDFGMDLGAL LVKPERLCSM ESPYQSVQTQ PTPFADTSID ITATTAAAAA  300
AFTTNNNCPF LDSSASLLLQ RPNTLSQDSE SLLWDVEDQR QSFLNPSGFS NSNLCSFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114141KKRKSRTGSSFNSAQSKGTKEQKGKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-54bHLH family protein