PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015934.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 145aa    MW: 16788.5 Da    PI: 10.5558
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015934.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.56.3e-1066923056
                 HHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox 30 reeLAkklgLterqVkvWFqNrRakek 56
                 ++  Ak+l+L  rqV vWFqN+R + +
  PCP015934.1 66 KQAFAKQLNLRSRQVDVWFQNKRSRPR 92
                 5789*******************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MSKKKLMLSK EQSLLLDETF KKLNTVNPVR FFCLDKGVLV FTDGLISGNG AILVVKQGCF  60
VFQKLKQAFA KQLNLRSRQV DVWFQNKRSR PRGFNRLIMD SDEDDADKEK GHYLITNRIS  120
AIFSMLEQYL ITNRQQTKSA FSFLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.12e-14HD-ZIP family protein