PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016159.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 241aa    MW: 26979.9 Da    PI: 6.1605
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016159.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.82.5e-24180225146
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk 46 
                  ldDg++WrKYG+K+vk+s++pr+YY+C+ +gC vkk+ver++edp+
  PCP016159.1 180 LDDGFKWRKYGKKVVKNSPHPRNYYKCSVEGCLVKKRVERDREDPR 225
                  59******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MKREPISFTL RSVIDVFYWI SLLVVVDALT TKRGDNEGGG VNERLVNQSQ LLVELDGGNE  60
RRGVFVFSAT NRLYGAHVHF KSQKQQSAES PETNDFSDNS NFEFSEFLMI GEWLDGDPSS  120
VASELSVQNS GFQANEADES GAGSSQPGGS TSRGESGSSR ERQETRERVA FKTKSEVEIL  180
DDGFKWRKYG KKVVKNSPHP RNYYKCSVEG CLVKKRVERD REDPRHPVLS CVMDIKKADA  240
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.16e-34WRKY family protein