PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016164.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Nin-like

Protein Properties

Length: 1245aa MW: 141309 Da PI: 6.8197

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016164.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.1	8.3e-24	85	133	2	50
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++++l+dl+ yF+lpi++AA+ L+vc+Tv+KriCR+ G++RWP+Rk++ PCP016164.1 85 TASMTLDDLRDYFHLPIEKAARRLKVCPTVVKRICRRSGLNRWPSRKVQ 133 6899*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1245 aa Download sequence
MQYCLERKLE GYILQQDPMA VFYEALCIGL EWDDILNTDD FTFPPSPPNS GRVGEVEQQQ 60 PADDQPHAAE DENERISLAA QRERTASMTL DDLRDYFHLP IEKAARRLKV CPTVVKRICR 120 RSGLNRWPSR KVQQCRGGVK ALSSSERTLK LRRKLSLGFH KVRRGESTLK LRTRVAERPS 180 MLQKKYTIKA ARDDRHVAVL DDLTSDQCTE LQEMSRSLVN VEYRGHNKRG VKYDWKMKVD 240 SYLPDQRCTI VSSILFMPLP GKEMISNKQQ QNHTRTVQIA QGIRLWFMPG VAEMLIEMIP 300 EPDDAWFGLD IKRTEEGLNC IHSVVKGSAS DRSGLGILHE EAYASGYQLV ISSILGLVQE 360 LCAKEMAVEA DRIFDDVWEM NICIVWGKKL GNTKRARARE LPTMPPSTVE GRALRKSMAT 420 PARALINPSL TTTDFNAAVR INSLLKILNP QKPDRSNLGL AALNRFSPLL KPSFVIHVIK 480 SQANPHRALF FFNWASNPNP NPNNYSHTHH CYVAITDLLL SHSLFSTAAS LLQESNRLND 540 FLVSRFIAVH GGRGDIGAAM DWFHKAKLIE NGKCLFSYNA ILGALVRADR MSVAKEIYDQ 600 IVKEGMVKPD VSTCSVMING FCKMGEMENA QKVFDEMICE PDVITYSTMI RGFCKMGDFD 660 SARKVCGQMR EKKDCLPNTV TYTILIDGYC KKGELEEAIK CMNEMEKQGC EPNQVTYSAL 720 IHGFCKKGDL DSARKVFDKM ICEPDVITYN TMILGFCKKG DLDSARKVFC QMREKKDCLP 780 NTVTYSILID GARRVLSRMR ESKDCLPNTV TYTTLIDGYC KKGELEEAMK CMSEMERQGC 840 EPNQVTYSAL IHGFCKTGDL DRARRVLSWM RESKDCLPNT VTYTTLIDGY CKKGELEEAM 900 RCMSEMEKQG CEPNQVTYNA LIHGFCKMGE MENAQKLFNE MTCEPNVITY NTMIHGFCKT 960 DFLWNNYIFS LESFSVLVKE KGMAVEDMDG GAPYNPRTVE EVFRDFKGRR AGMIKALTTE 1020 VEDFFQQCDP EKENLCLYGF PSEQWEVNLP AEEVPPELPE PALGINFARD GMQEKDWLSL 1080 VAVHSDAWLL AVAFYFGARF GFDKADRKRL FNMINELPTI FEVVTGTAKK QVKEKSSNSN 1140 HGSNRSKSNS KRGSEPQPRH SKAMQSKDAE EDEEEGVEDE EEDEDEHGET LCGACGENYA 1200 ADEFWICCDI CEKWFHGKCV KITPARAEHI KQYKCPSCSN KRAKH

Sequence ? help Back to Top

Protein Sequence Length: 1245 aa Download sequence

MQYCLERKLE GYILQQDPMA VFYEALCIGL EWDDILNTDD FTFPPSPPNS GRVGEVEQQQ  60
PADDQPHAAE DENERISLAA QRERTASMTL DDLRDYFHLP IEKAARRLKV CPTVVKRICR  120
RSGLNRWPSR KVQQCRGGVK ALSSSERTLK LRRKLSLGFH KVRRGESTLK LRTRVAERPS  180
MLQKKYTIKA ARDDRHVAVL DDLTSDQCTE LQEMSRSLVN VEYRGHNKRG VKYDWKMKVD  240
SYLPDQRCTI VSSILFMPLP GKEMISNKQQ QNHTRTVQIA QGIRLWFMPG VAEMLIEMIP  300
EPDDAWFGLD IKRTEEGLNC IHSVVKGSAS DRSGLGILHE EAYASGYQLV ISSILGLVQE  360
LCAKEMAVEA DRIFDDVWEM NICIVWGKKL GNTKRARARE LPTMPPSTVE GRALRKSMAT  420
PARALINPSL TTTDFNAAVR INSLLKILNP QKPDRSNLGL AALNRFSPLL KPSFVIHVIK  480
SQANPHRALF FFNWASNPNP NPNNYSHTHH CYVAITDLLL SHSLFSTAAS LLQESNRLND  540
FLVSRFIAVH GGRGDIGAAM DWFHKAKLIE NGKCLFSYNA ILGALVRADR MSVAKEIYDQ  600
IVKEGMVKPD VSTCSVMING FCKMGEMENA QKVFDEMICE PDVITYSTMI RGFCKMGDFD  660
SARKVCGQMR EKKDCLPNTV TYTILIDGYC KKGELEEAIK CMNEMEKQGC EPNQVTYSAL  720
IHGFCKKGDL DSARKVFDKM ICEPDVITYN TMILGFCKKG DLDSARKVFC QMREKKDCLP  780
NTVTYSILID GARRVLSRMR ESKDCLPNTV TYTTLIDGYC KKGELEEAMK CMSEMERQGC  840
EPNQVTYSAL IHGFCKTGDL DRARRVLSWM RESKDCLPNT VTYTTLIDGY CKKGELEEAM  900
RCMSEMEKQG CEPNQVTYNA LIHGFCKMGE MENAQKLFNE MTCEPNVITY NTMIHGFCKT  960
DFLWNNYIFS LESFSVLVKE KGMAVEDMDG GAPYNPRTVE EVFRDFKGRR AGMIKALTTE  1020
VEDFFQQCDP EKENLCLYGF PSEQWEVNLP AEEVPPELPE PALGINFARD GMQEKDWLSL  1080
VAVHSDAWLL AVAFYFGARF GFDKADRKRL FNMINELPTI FEVVTGTAKK QVKEKSSNSN  1140
HGSNRSKSNS KRGSEPQPRH SKAMQSKDAE EDEEEGVEDE EEDEDEHGET LCGACGENYA  1200
ADEFWICCDI CEKWFHGKCV KITPARAEHI KQYKCPSCSN KRAKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64100.2	6e-63	NAC family protein