PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016172.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 222aa    MW: 24732.4 Da    PI: 4.6159
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016172.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34e-099391947
                     TTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 19 lGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +  +   +W++Ia +++ gRt++++k++w++ 
      PCP016172.1  9 HKERqhfRWSLIAGRLP-GRTDNEIKNYWNTT 39
                     55556667*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVKLSETRHK ERQHFRWSLI AGRLPGRTDN EIKNYWNTTL WKKSKADSPS GCSKETSQHP  60
SKSVVKKKDV ESKTTSTAAA KPLVIRTKAT RLSKILVPQN FPSDENYTAA AANPLELQSH  120
QTQLAEQGGS TEEFPRTNAD DCSNILKNFG CDDDDIDVKG DQYCNEFQSL DSIPLDEAMI  180
NDGCWTVGNG CELEDYGASL DLDSLAFLLD SEDWPSQENV IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.15e-12MYB family protein