PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016299.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 82aa    MW: 9444.45 Da    PI: 6.5316
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016299.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.7e-111659344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+e  + + +a +++ ++   +W ++ar +g g++++++k ++
      PCP016299.1 16 SWTPEQNKEFENALALYDKDtpdRWQKVARAVG-GKSAEEVKRHY 59
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MMASNSLTSS RSSSSSWTPE QNKEFENALA LYDKDTPDRW QKVARAVGGK SAEEVKRHYE  60
ILIEDVKHIE SGRVPFPDYR RE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-32MYB_related family protein