PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016466.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 323aa    MW: 36538.2 Da    PI: 4.9952
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016466.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.75.1e-14125176155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+++P +   + ++ + a+i   A++Y+k+L+
  PCP016466.1 125 QRMTHIAVERNRRKQMNEYLSVLRSIMPDS---YVQRGDQASIIGGAINYVKELE 176
                  79****************************...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MALEAVVFPQ DPFSYTTNKD LYNLLGGNLS YVDDQQQASL DFLDYQTDQN YPNYGSTYSS  60
PPSMVPHFNE LHLSNPNPVA STTNPTGDQP EFQLPLEDTI NMSRSSRVKR RRAKSKKNEE  120
EIENQRMTHI AVERNRRKQM NEYLSVLRSI MPDSYVQRGD QASIIGGAIN YVKELEQEVQ  180
FLGVQKTNDR APFSEFFTFP QYSSRSSTSD HESAVAAMAE LPLLECRSSK IAADIEVTMV  240
ESHASLKVRS KKVPKQLLKI VSGLHDMHLT ILHLNVVTVD DIVLYSLSLK VEDECMLTSV  300
DEIATAVHEM LARIQEEAML NLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126137RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-78bHLH family protein