PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016501.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 763aa MW: 84634.3 Da PI: 4.614

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016501.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00039	475	507	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq PCP016501.1 475 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 507 6788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MAEECGVAIS SSSAQLTQQN WWDLVSSTNP WQQQQQLNQK YSNSSNNNCD DVDQDVSISS 60 TSFTNASNHS SLSVDSSRRL LADQRSASSN DDLINGEQDV SISSTSFTNA SNHSSLSVDS 120 SRRLLADQRS ASSNDDLING EQVSDNHIWN HVLLSVNANH DLRNNDHGVG ENFIDALSSK 180 GLSTHHVMYD EPACDYLKKL DNNSTWEFTN SAASNFNNFE KQINGGFMDN NMNISIENER 240 LTKLSNLVSS WSIAPPEPQL VLNNFPPHQV MDHDRHYSQP NLCHLKPQPF FNDSTSSCNP 300 QMGITNRNSA SSLFSCYRSQ NMKVDDQNHG HPNGIEYQIG LDNPMAADHH NSKYFNGNGS 360 ILPDSYSSCT STNAARNFAD VISFTSRLGN KPLNDLHAPK PCFKTLNSSD HSKKQNLQTS 420 SSARMSGGRG LGIANEGKKK RTDDTSSETA VKKPKQETST VSSVKMQAPK VKLGDRITAL 480 QQIVSPFGKT DTASVLYEAI QYIKFLQEQV HVLLNSPYLK TNSPKDPWVM ERKDHKGDTK 540 VDLRSKGLCL VPVSFLVKFS HAKELMEVYS HSCFNCELVI PPPSTPPVSS RSLAPQRPPP 600 IESFAFRSAS KPQQLSQDDK DFDSNCVEIK HELADDDSDC VVIQNEMEND DADEIPEARP 660 INRGHRFVVE DEDSDGDWAN IESTSEEEDE QDEDSDGDWT NIESTSEEED EQVEELEDDD 720 VVGKALQKCA KISADLRNEL HGSSTAAVSN WAASTPSAFS YFY

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MAEECGVAIS SSSAQLTQQN WWDLVSSTNP WQQQQQLNQK YSNSSNNNCD DVDQDVSISS  60
TSFTNASNHS SLSVDSSRRL LADQRSASSN DDLINGEQDV SISSTSFTNA SNHSSLSVDS  120
SRRLLADQRS ASSNDDLING EQVSDNHIWN HVLLSVNANH DLRNNDHGVG ENFIDALSSK  180
GLSTHHVMYD EPACDYLKKL DNNSTWEFTN SAASNFNNFE KQINGGFMDN NMNISIENER  240
LTKLSNLVSS WSIAPPEPQL VLNNFPPHQV MDHDRHYSQP NLCHLKPQPF FNDSTSSCNP  300
QMGITNRNSA SSLFSCYRSQ NMKVDDQNHG HPNGIEYQIG LDNPMAADHH NSKYFNGNGS  360
ILPDSYSSCT STNAARNFAD VISFTSRLGN KPLNDLHAPK PCFKTLNSSD HSKKQNLQTS  420
SSARMSGGRG LGIANEGKKK RTDDTSSETA VKKPKQETST VSSVKMQAPK VKLGDRITAL  480
QQIVSPFGKT DTASVLYEAI QYIKFLQEQV HVLLNSPYLK TNSPKDPWVM ERKDHKGDTK  540
VDLRSKGLCL VPVSFLVKFS HAKELMEVYS HSCFNCELVI PPPSTPPVSS RSLAPQRPPP  600
IESFAFRSAS KPQQLSQDDK DFDSNCVEIK HELADDDSDC VVIQNEMEND DADEIPEARP  660
INRGHRFVVE DEDSDGDWAN IESTSEEEDE QDEDSDGDWT NIESTSEEED EQVEELEDDD  720
VVGKALQKCA KISADLRNEL HGSSTAAVSN WAASTPSAFS YFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	2e-44	bHLH family protein