PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016525.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 254aa    MW: 27803.7 Da    PI: 5.9738
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016525.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002396118123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C++ F ++  L  H++ H
  PCP016525.1  96 FSCNYCKRKFYSSQALGGHQNAH 118
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MLTQNLNLEF ENDSEVTGQV TSSIPLHEES PDPSKDSTTT SSCLTNQNHQ QQDPGPVSLD  60
LTLQFSSGDT ELKGTGETSS EAVAPPTSEG TIPRVFSCNY CKRKFYSSQA LGGHQNAHKR  120
ERTMAKRAMR MGMFPDRYTS LASLPLHGSA ASAFRSLGIQ AHSAVHQNTM ITSDHQRFPV  180
PDTRGVARFH QDYFGVPMFM DEDDVGMFWP GSFRQVGEEA GGHQLAQNPN MNTGTSMEPR  240
NSTSSSSPDL SLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-46C2H2 family protein