PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016691.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 361aa MW: 40500.7 Da PI: 7.9771

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016691.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.9	1.4e-55	17	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+++yL+kkv ++++++ +++ evd++k+ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat +gyWkatgkdke+++ ++ PCP016691.1 17 LPPGFRFHPTDEELISHYLHKKVIDTSFSC-KAMGEVDLNKSEPWQLPLKAKMGEKEWYFFCVRDRKYPTGLRTNRATGAGYWKATGKDKEIYR-AKS 112 79**************************.88***********99999*************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfykgrapkgek++Wvmheyrl PCP016691.1 113 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 142 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MENVPAGIVQ EDDQIDLPPG FRFHPTDEEL ISHYLHKKVI DTSFSCKAMG EVDLNKSEPW 60 QLPLKAKMGE KEWYFFCVRD RKYPTGLRTN RATGAGYWKA TGKDKEIYRA KSLVGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLDGKFSVHN LPKTAKNEWV ICRVFEKNSG GKKTHISGFM 180 TLASLGNEIG PSGLPPLMDS SPYSPVKAKP ASESHYVPCF SNPDPTDVQR NQGNIVDYMN 240 NNPLFGVSSN SSNFFPRIPL PNSFYSAHNA PISTSFKFPG SDILQDQSIL KALLENNAAN 300 MRQQSYKTER EMVSVSQETG LTSDMNAEIS SVISNLEMAT RPYGDQDPPA EAAGLDNFWN 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MENVPAGIVQ EDDQIDLPPG FRFHPTDEEL ISHYLHKKVI DTSFSCKAMG EVDLNKSEPW  60
QLPLKAKMGE KEWYFFCVRD RKYPTGLRTN RATGAGYWKA TGKDKEIYRA KSLVGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLDGKFSVHN LPKTAKNEWV ICRVFEKNSG GKKTHISGFM  180
TLASLGNEIG PSGLPPLMDS SPYSPVKAKP ASESHYVPCF SNPDPTDVQR NQGNIVDYMN  240
NNPLFGVSSN SSNFFPRIPL PNSFYSAHNA PISTSFKFPG SDILQDQSIL KALLENNAAN  300
MRQQSYKTER EMVSVSQETG LTSDMNAEIS SVISNLEMAT RPYGDQDPPA EAAGLDNFWN  360
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-149	NAC family protein