PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016720.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 316aa    MW: 35313.3 Da    PI: 8.9074
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016720.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-07255299143
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      + +W+  Ed  l++a k ++++   +W++Ia+ ++ g++   c  r
      PCP016720.1 255 KESWSSTEDIALLNALKAFPKEvsmRWEKIAAAVP-GKSKAACMKR 299
                      578********************************.*******877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEFLDEDARP RFLFQSKAVA SSATDLQPHY KNLSKPFIFF TILISFLLMG LAFFLLSEPY  60
QSLLIWAALA LLIGPFAPAP VTGGDIRVGH GPIVDFPEIA TQVEDESKKR VSQKRSKPRR  120
FDELGADSTP MPETISGSVR EKKRSEASEG NGNGSVFFGE ETEWVEEDVE FLKKLLLKHP  180
VGKLRRWEVI TESFQGKHKV ESVIKRAKEL GEKKVSDSDS YAEFLKKRKP NDKKTESGNQ  240
ELGDESVADN GEVKKESWSS TEDIALLNAL KAFPKEVSMR WEKIAAAVPG KSKAACMKRV  300
AELKKGFRSA KASNEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-69MYB_related family protein