PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016737.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 237aa MW: 26965.4 Da PI: 8.2104

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016737.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.7	3.1e-14	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +lv +++++G +W+ ++ g+ R++k+c++rw +yl PCP016737.1 16 KGPWSPEEDHKLVAYIQRYGIWNWSQMPKPAGLARSGKSCRLRWVNYL 63 79****************99**********************97 PP
2	Myb_DNA-binding	52.8	9.3e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e ++++++ G++ W++Ia++++ gRt++++k++w++++ PCP016737.1 69 RGNFSKDEEETILELHQAIGNR-WSAIAARLP-GRTDNEIKNYWHTHM 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MAKRTQRCEK TVAVKKGPWS PEEDHKLVAY IQRYGIWNWS QMPKPAGLAR SGKSCRLRWV 60 NYLRPDIKRG NFSKDEEETI LELHQAIGNR WSAIAARLPG RTDNEIKNYW HTHMKKRFKA 120 AIESVHEEAK GSGDKEASKN KLSEAGQLFL VDEATKVTSL KLEATCSASS SVFFPVWEVD 180 DRKGQIAEQS VCASDVTFGE LQSLDSQVWQ QEPIFPCDSY INHVTSDYWV SLIDKTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-57	MYB family protein