PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016788.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 152aa    MW: 16911.1 Da    PI: 10.4196
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016788.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.61e-2790148259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D+y+WrKYGqK++kgs +pr+YY+C+s  g p++k+v+r+ edp ++++tY+geH+h+
  PCP016788.1  90 SDEYSWRKYGQKPIKGSSYPRGYYQCSSIrGYPARKHVQRCLEDPAMLVVTYQGEHKHS 148
                  69************************99879***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MVFSGRNSGI NLAFDRSSSS CKTSTTSARS FMSCLSIGGC AATTGRDSFR LIGGVPWVSG  60
QISQQQRRKL KEKRSFKVPA ISDKISDIPS DEYSWRKYGQ KPIKGSSYPR GYYQCSSIRG  120
YPARKHVQRC LEDPAMLVVT YQGEHKHSQS AQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.14e-50WRKY family protein