PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016853.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NF-YB

Protein Properties

Length: 149aa MW: 16640.7 Da PI: 8.5009

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016853.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	153.1	5.3e-48	10	105	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqd +lPianv+rimk++lP +akis++ak+t+qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++++++ + yl+kyre+e++k PCP016853.1 10 QEQDGMLPIANVGRIMKQILPPRAKISREAKQTMQECATEFLSFVTGEASDKCHKENRKTVNGDDICWALSALGFDNHAQATTRYLHKYREAERDK 105 69********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MDRSINMVDQ EQDGMLPIAN VGRIMKQILP PRAKISREAK QTMQECATEF LSFVTGEASD 60 KCHKENRKTV NGDDICWALS ALGFDNHAQA TTRYLHKYRE AERDKAAANN QNTAHIKSHG 120 GLQVAQQNQT SNLEFRVLGK GDNSLVTKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	2e-54	NF-YB family protein