PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016871.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 196aa MW: 22210.2 Da PI: 4.8728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016871.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.8	2.6e-05	54	89	16	54
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++f eL +l ++ +s+K +Ka+iL A++ +++L PCP016871.1 54 LRKRFVELNGVLEPR---RSPKTDKAAILDDAIRVLNQL 89 578899999999999...9*****************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MEEWIDYLDY IDETQPTDFL WPNRTPFGDF EFSALDVPAA AASSASQLQE KECLRKRFVE 60 LNGVLEPRRS PKTDKAAILD DAIRVLNQLR AEAQELTETN QKLLEEVKSL KAEKNEFREE 120 KLVLKADKER LEQQLKGMAI SPSGFVPTHP AVPAAYHPGA NKMAVYPSYS LVPMWHYLPP 180 SARDTSCDHE LRPPAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14410.2	2e-65	bHLH family protein