PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016876.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 229aa    MW: 25764.5 Da    PI: 4.4943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016876.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-1889139255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  PCP016876.1  89 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 139
                  69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MNYSIFDPPN SNLSPESSFG SSFSWDDGLK FGNNSLPFNE NDSEEMLLYG LISEATQEIT  60
SSVSVSANPI KEEEVSSAFE EENLKEEKSY RGVRRRPWGK FAAEIRDSTR HGIRVWLGTF  120
DSAEAAALAY DQAAFSMRGS TAILNFPVER VRESLREINY GTSDLEGCSP VMALKRKHSM  180
RRETGFKKSK VDRDVRIENV VVFEDLGVDY LEELLNSTEN TSTSATPNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-71ERF family protein