PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016924.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 430aa    MW: 47462.2 Da    PI: 7.329
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016924.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-175099255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  PCP016924.1 50 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 99
                 59*******.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MEEAFRRMNG FSHASEPDLI TDPPSKSTTA ATNKRALRDT AAAAASGAMR YRGVRRRPWG  60
RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYSS SPPTDVVADH  120
PFPHFSFHKH SHPSAKTRNG YGGANHSPSW NSVPFSQYPS PNQNDGYGGA PTPAATSFNM  180
PFLQNFMKYS SPNPSPVYND QFPYNINGSS SASLVNTTSY GQRHETNISG STKFPIGSSS  240
SMATAPTFTT TTLPFIDITS PPPTKPISHD YQHDYSSDFF PMEPAYSGLL EEVIHRFFPK  300
PTKKSSNDDH ISTQDYGHPS SSIQTACFDG SSTRTVGGYS KNEQSQVNVC YNFHELLPLP  360
QPQQQQQGNS LNGLMDHHQQ QVSQPQAVPV YNDHVPFNFQ MGGGADHSMG MDNMFQYPEF  420
MGGFAARVQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.19e-14ERF family protein