PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016970.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 320aa    MW: 35147.9 Da    PI: 7.1515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016970.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-174392255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+ +++a+  l+g
  PCP016970.1 43 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARSYDEAACLLRG 92
                 799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEFQFQQPKQ VSFAAAGIPK SSSKVGKLKG RNNNRRSNNN ANKFVGVRQR PSGRWVAEIK  60
DTTQKIRMWL GTFETAEEAA RSYDEAACLL RGSNARTNFI THVSLDSPLA SRIWNLLNTK  120
KGGGGATKQL ALLHHQSSST STTTSTSSDH DHLPPPSKQL ARKSSTCTST SRGSDTTSPS  180
SEVFQDNSLL FDNVYKPDLR NCNEDFELSS SSNTSQSDLP SWVSYQTGVD CFSFAQQAFE  240
FPKHQAAAAL SSAESNTTTT STIITAGEAD SGLMDFERLK VERQISASLY AMNGMQEYME  300
TVHDPNEALW DLPPLCSLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-37ERF family protein