PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017002.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 217aa    MW: 24309.8 Da    PI: 4.3862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-171665255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  PCP017002.1 16 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAALFCLRG 65
                 8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVKQTIGKPS ERNDIKYKGV RKRKWGKWVS EIRLPNSRER IWLGSYDAPE KAARAFDAAL  60
FCLRGRTAKF NFPDSPPEIS GGRSLSPAEI QTEAARFANS ELPRSHQSMS ELQVESQSMS  120
ELQAESPSPS VSEGSGTVFV DSEFLVTPND SFSDPFSTFG SGNYATEYGL FPGFDEMNYQ  180
FFSPAEAVPT PDVDYYAEEN LDGQFFSPAE ESFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-61ERF family protein