PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017067.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SAP
Protein Properties Length: 462aa    MW: 50848.3 Da    PI: 6.7815
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017067.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP739.92.2e-225124602454
          SAP   2 ssssssssseseegseggeggdass...gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrl 96 
                  sssssssss++++g+++  ++       g++egpsssr+r++nevwpePf+eala+qvai+asrs+Grlaaa+alanvfqvcstwravsrsdllw+rl
  PCP017067.1  12 SSSSSSSSSHDGNGNDSAGPSS--VrrgGDFEGPSSSRRRSVNEVWPEPFVEALAAQVAIEASRSVGRLAAAPALANVFQVCSTWRAVSRSDLLWRRL 107
                  4455555555555544444333..13349********************************************************************* PP

          SAP  97 trriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrl 194
                  trriW rt llrd Wr+ey+y+hrta+nfrt+r++++tl+fdp+ v++   +d l+Crcl+lsd +la+GfadG+vrlfdl+trlhvstf+pq rdrl
  PCP017067.1 108 TRRIWGRTILLRDRWRDEYVYWHRTATNFRTQRSTHTTLHFDPSGVED---PDGLTCRCLTLSDAHLACGFADGTVRLFDLATRLHVSTFRPQPRDRL 202
                  *******************************************97776...799******************************************** PP

          SAP 195 GrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeav 292
                  Grfsrav+Givi+ds+l+fa ldGdihva+i+g     arra+lGdvvndG+lvdf+Gs+rWwvGlyaGvpGrafhiW++ te+l+fvGG+ltd ea+
  PCP017067.1 203 GRFSRAVTGIVITDSTLIFAMLDGDIHVAIING--PQIARRAHLGDVVNDGVLVDFTGSERWWVGLYAGVPGRAFHIWNGLTEQLTFVGGTLTDQEAL 298
                  *********************************..6799*********************************************************** PP

          SAP 293 mGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgv 389
                  mGWhmlte+te+vGrvrvt+ etavaCts r++vfdlrnqg vl eee rrG+iv++ d+s +a+v+v +rG a+vrr ++leevcrf v+g +q  v
  PCP017067.1 299 MGWHMLTEMTEFVGRVRVTSWETAVACTSARVIVFDLRNQGFVLSEEEYRRGIIVTAADVSRSAFVIVGRRGLANVRRTDTLEEVCRFIVSGaSQMAV 396
                  ********************************************************************************************999*** PP

          SAP 390 lgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                  +gC+n gyal+++ggv+rvWe+e+ + yl s+ e +gevna+v d+rhva++s  +t+hl+dfga
  PCP017067.1 397 MGCMNEGYALMCGGGVVRVWEVERGA-YLDSFMEMIGEVNAFVCDERHVAACSGGTTLHLWDFGA 460
                  ************************77.*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MSTSYSSAPS TSSSSSSSSS HDGNGNDSAG PSSVRRGGDF EGPSSSRRRS VNEVWPEPFV  60
EALAAQVAIE ASRSVGRLAA APALANVFQV CSTWRAVSRS DLLWRRLTRR IWGRTILLRD  120
RWRDEYVYWH RTATNFRTQR STHTTLHFDP SGVEDPDGLT CRCLTLSDAH LACGFADGTV  180
RLFDLATRLH VSTFRPQPRD RLGRFSRAVT GIVITDSTLI FAMLDGDIHV AIINGPQIAR  240
RAHLGDVVND GVLVDFTGSE RWWVGLYAGV PGRAFHIWNG LTEQLTFVGG TLTDQEALMG  300
WHMLTEMTEF VGRVRVTSWE TAVACTSARV IVFDLRNQGF VLSEEEYRRG IIVTAADVSR  360
SAFVIVGRRG LANVRRTDTL EEVCRFIVSG ASQMAVMGCM NEGYALMCGG GVVRVWEVER  420
GAYLDSFMEM IGEVNAFVCD ERHVAACSGG TTLHLWDFGA AD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-167SAP family protein