PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017101.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 261aa    MW: 29296.8 Da    PI: 5.8643
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017101.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.4e-212681156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 +++ +++t++q+++Le +++++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  PCP017101.1 26 KKRYHRHTAHQIQRLEGMYKECPHPDEKQRMQLSRELGLAPRQIKFWFQNRRTQMK 81
                 678899***********************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEYGRGGGGS GGGDHHDDAS GSQRRKKRYH RHTAHQIQRL EGMYKECPHP DEKQRMQLSR  60
ELGLAPRQIK FWFQNRRTQM KAQNERADNC ALRAENDKIR CENIAIREAL KNVICPSCGV  120
PPLNEDSYFD EQKLQMENAQ LKQELDRVSS IAAKYIGRPI SQLPPVQPIH ISSLDLSMAS  180
FGGHGLAGPS LDLDLIPGSA SSSMPNLPYQ PNGFSDMDKS LMTDIAANAM EELLXXXXXX  240
XXXEQIIEYS VGECAWLEEE C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-105HD-ZIP family protein