PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017140.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 277aa    MW: 29858.9 Da    PI: 4.991
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017140.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-1865115155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  PCP017140.1  65 PVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALTIKG 115
                  68*****998.**********854...59*********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MADPTHSENE SSFNSSSPSP PSPSSSGFSQ SIPNSGLNQL PVRSDSPGPD QKRAKRARET  60
SSKHPVYRGV RMRTWGKWVS EIREPRKKNR IWLGTFSTPE MAARAHDVAA LTIKGNSAIL  120
NFPGLAGSLP RPDSNSPRDI QAAAAKAASM ETLNPPPLPP PLHSSSSSSA LSQSSSSSSM  180
VGTSTSGDAG TPEELGEIVE LPSLGTSYES AESGSEFVFA DSVEGWLYPP PWWHNSYLEE  240
EYGYNNLINS IIRDDQMLMS EPPAAECVGV EAFLWQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-66ERF family protein