PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017173.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 307aa    MW: 34431 Da    PI: 4.5649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017173.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.7e-19112161154
          AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  s y+GVr++k +g+W+AeIrd +     +  r +lg+f tae+A ka++a r+++e
  PCP017173.1 112 SPYRGVRQRK-WGKWAAEIRDpF-----KgVRLWLGTFNTAEDASKAYEAKRLEFE 161
                  68*******9.**********55.....45***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAVPRKQPLN QRDRMKKSNP AHQSKITRKV RIICYDPDAT DDSSSSEDEG GRERRFAKNP  60
KRFVREVTFC PSAHPKPGTA EPESSSQDSN GVRTPKPSKK ALFAKSHRQS SSPYRGVRQR  120
KWGKWAAEIR DPFKGVRLWL GTFNTAEDAS KAYEAKRLEF EEMLAAATSA SAVVSNKNSY  180
NNVEPVSSED SDSVVSQRSP SCVLDLEKET ADESTNIEEL QIPDLGFLDE TLGPLHFDQE  240
LNLGPELDSL YLEDFGQFFD NYSSIEDIQI PGFESDEPSS LPDCDFEDLG KDDIACWLDE  300
PLNIVSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-27ERF family protein