PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017353.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 1108aa MW: 124730 Da PI: 5.307

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017353.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.8	3.4e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 l+ k+rwl++ ei++iL nf+k+++++e+++ p+ gsl+L++rk++ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+een++fqrr+y PCP017353.1 20 LEAKHRWLRPAEICEILRNFQKFDISSEPANMPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRSY 117 6679******************************************************************************************** PP CG-1 100 wlLeeelekivlvhylevk 118 w+Lee+l++ivlvhy+evk PCP017353.1 118 WMLEEDLQHIVLVHYREVK 136 **************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1108 aa Download sequence
MAEIKRYGLG NQLDIAQILL EAKHRWLRPA EICEILRNFQ KFDISSEPAN MPPGGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML 120 EEDLQHIVLV HYREVKGNRT NYNHFKGTEE AVPYSHETEE IALNSEMDNS VSSSFNPNNF 180 QMCSQAADTT SLSSAQASEF EDAESAYKHQ ASSQLQPFLE LLQPKAEKIN AGFSNAFYPM 240 SFSNEYQEKL SAVPGVNFSS RTEAYRKEDG NDAGITYDPR KNLNSAVWDG ALGNITTGFQ 300 SLPFQPSISA THSDSIGIIS QQENETLGHL FTDNFGKKQI YEDKPRVQQS WQTLEANSSG 360 SSSWPVDRNL HSDTAYDVTT RFHGGVDDSN LLNSPVCRVD SEETNNYSMP NDLQILPSNT 420 EQEYHLKSIS KRNETIEGKY NHTFATKPLL DEGLKKLDSF SRWMSKELGD MEETHTQSNS 480 ETYWDTVESD SGVDESSIPL QVRLDSYMLG PSLSQDQLFS IIDFSPNWAY ENSEIKVLIT 540 GRFLNSQQAE SCKWSCMFGE VEVPAEVIAD SVLRCYTPIH KAGRIPFYVT CSNRLACSEI 600 REFEYRVGQI PDYDVKDDYS GCTNEILNMR FGKLLSLSSS SPTFDPTSVA ENSEIISKID 660 LLLKNDNGEW DKMLQLTSDE DFSLERVEDQ LLQQLLKEKL HAWLLQKLAA GGKGPSVLDE 720 GGQGVLHFGA ALGYDWVLLP TITAGVSVNF RDINGWTALH WAAFCGRERT VASLISLGAA 780 PGLLTDPRTK YPNGRTPADL ASAQGHKGIA GYLAESALSD QLSFLNLDIK EDNNADISGA 840 NAVRTVSEQI ATPIGNGDLT DGLSLRDSLT AVCNATQAAA RIHQVFRVKS FQLKQLKEYG 900 SDNFGISDED ALSMIAVKSH KPGKRDEHVD AAAIRIQNKF RSWKGRKDYL IIRQRIVKIQ 960 AHVRGHQVRK NYRKIVWSVG IVEKIILRWR RKGSGLRGFK PEPLTEAPSM QASSSKDDDY 1020 DVLKEGRKQT EQRLQKALAR VKSMVQYPEA RDQYCRLLNV VTEIQETKVV YDSGTTSSEG 1080 RVDMDHDLID IAALLDEEDI YMPTEAPE

Sequence ? help Back to Top

Protein Sequence Length: 1108 aa Download sequence

MAEIKRYGLG NQLDIAQILL EAKHRWLRPA EICEILRNFQ KFDISSEPAN MPPGGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML  120
EEDLQHIVLV HYREVKGNRT NYNHFKGTEE AVPYSHETEE IALNSEMDNS VSSSFNPNNF  180
QMCSQAADTT SLSSAQASEF EDAESAYKHQ ASSQLQPFLE LLQPKAEKIN AGFSNAFYPM  240
SFSNEYQEKL SAVPGVNFSS RTEAYRKEDG NDAGITYDPR KNLNSAVWDG ALGNITTGFQ  300
SLPFQPSISA THSDSIGIIS QQENETLGHL FTDNFGKKQI YEDKPRVQQS WQTLEANSSG  360
SSSWPVDRNL HSDTAYDVTT RFHGGVDDSN LLNSPVCRVD SEETNNYSMP NDLQILPSNT  420
EQEYHLKSIS KRNETIEGKY NHTFATKPLL DEGLKKLDSF SRWMSKELGD MEETHTQSNS  480
ETYWDTVESD SGVDESSIPL QVRLDSYMLG PSLSQDQLFS IIDFSPNWAY ENSEIKVLIT  540
GRFLNSQQAE SCKWSCMFGE VEVPAEVIAD SVLRCYTPIH KAGRIPFYVT CSNRLACSEI  600
REFEYRVGQI PDYDVKDDYS GCTNEILNMR FGKLLSLSSS SPTFDPTSVA ENSEIISKID  660
LLLKNDNGEW DKMLQLTSDE DFSLERVEDQ LLQQLLKEKL HAWLLQKLAA GGKGPSVLDE  720
GGQGVLHFGA ALGYDWVLLP TITAGVSVNF RDINGWTALH WAAFCGRERT VASLISLGAA  780
PGLLTDPRTK YPNGRTPADL ASAQGHKGIA GYLAESALSD QLSFLNLDIK EDNNADISGA  840
NAVRTVSEQI ATPIGNGDLT DGLSLRDSLT AVCNATQAAA RIHQVFRVKS FQLKQLKEYG  900
SDNFGISDED ALSMIAVKSH KPGKRDEHVD AAAIRIQNKF RSWKGRKDYL IIRQRIVKIQ  960
AHVRGHQVRK NYRKIVWSVG IVEKIILRWR RKGSGLRGFK PEPLTEAPSM QASSSKDDDY  1020
DVLKEGRKQT EQRLQKALAR VKSMVQYPEA RDQYCRLLNV VTEIQETKVV YDSGTTSSEG  1080
RVDMDHDLID IAALLDEEDI YMPTEAPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein