PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017394.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 238aa    MW: 26443.5 Da    PI: 7.5063
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017394.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.2e-19549149
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaa 49
                 ++y+GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a
  PCP017394.1  5 KKYRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEA 49
                 59*******9.**********8.....334********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVKSKKYRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAS VLMSGRNAKT  60
NFPITTTTTQ SNSTRAPVGS SDHPKTSSCD LDSPSEQKGL SEILHAKLRK CSKIPSPSMT  120
CLRLDNESSH IGVWQKRAGQ RSDNSNWVMT VPLGKKKNNS IVDPNNADDQ SALSSQFMSN  180
SDQSASIEAS SERAPQLTAE MDEEDKIALQ MIEELLNGNC ASPDLSFGIQ QGEERIYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-72ERF family protein