PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017426.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 260aa    MW: 30053 Da    PI: 5.1439
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017426.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86e-3054112259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+ +Hnh+
  PCP017426.1  54 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTCSHNHS 112
                  699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDATLSPEPD SDVSKELRPE TQSSKRRKLA HEKTVVTVKI GANVGKLKNE GPPSDLWSWR  60
KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERSKTDASV LIITYTCSHN HSGPPDVNVI  120
STTQQEHDQK QEQEQEQEQE QEQEQEQDQK QDQKQEQEQE HRKLEEHFHY IESPVRSSRE  180
EEHIFIAHDT SFGFLLDEKQ EPLSLSYSQL MSFSTPKLSE ENNDFFDELE ELPTFSSFPS  240
FMRRTNNLSF GIERIPSVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-35WRKY family protein