PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017458.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 252aa    MW: 28127.4 Da    PI: 9.8928
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017458.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-17136185155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PCP017458.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185
                  78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MLDLNLGFVS RDDVSMSQNK LLTTSPVECS GSFNSSSNLT VTGDDDDDST TLNFLAPNDD  60
VSANHQSGRR TIQLFPLAQS VSSSSSSSAA SKKQWLGLSS GSRLELEPIY YAPAEPRIVL  120
PQQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
IKFRGIEADI NFSVGDYEDD IKQMSNFTKE EFVHILRRQS TGFSRGSSKF RGVTLHKCGR  240
WEARMGQFLG KK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.28e-68AP2 family protein