PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017470.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 221aa    MW: 23842.4 Da    PI: 9.8523
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017470.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-192474155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa a+++a+++++g
  PCP017470.1 24 TRFRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAACAYDKAAREFRG 74
                 589*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MAPTTEKSPP KSGSEDPNPT SNETRFRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE  60
AACAYDKAAR EFRGGKAKTN FPTPTELHLD AVNIANMNNA AKLAATTNIS NSPSSHSSTV  120
ESSSPPSPRP LDLTLKTPRL STRGGYFTAA SGFRPLPASR PVIFFDALQH ARETCRFDPP  180
APTSGSGHSD SSSSSVVDFE RTSRNGRLDL DLNLPPPSEV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-26ERF family protein