PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017474.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 541aa MW: 59368.4 Da PI: 8.3434

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017474.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.9	1.4e-14	121	163	10	55
AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++g+WvAeIrdp + r +r +lg+f t eAa a+++a++kl+g PCP017474.1 121 RTWGKWVAEIRDP---N-RgARLWLGTFNTSTEAALAYDEAARKLYG 163 57********8...3.35**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MERSDSVGVA IGKRAGRSEW RIRLGMQKVC SLRVQFAAVN VVRVGGSDVR VVNGPLWTDF 60 TFKGYQVEMQ GDALVVINAL QKDTAALGNG QFGNILQDAS HMLKSFLRLK ATFGPGQTNK 120 RTWGKWVAEI RDPNRGARLW LGTFNTSTEA ALAYDEAARK LYGSSTKLNL PDDHHPRSSS 180 LSSANSTSSI SLLAACAGRQ AEARAFFVFG DSLVDNGNND YLATTARADS YPYGIDYPTH 240 RPTGRFSNGL NIPDLISEQI GSEPTLPYLS PQLTGQNLLV GANFASAGIG ILNDTGIQFL 300 NIIRIYKQLE YFQQYQTRVS ALVGPEQAQR LVNEALILIT LGGNDFVNNY YLLPFSARSR 360 QFSLPDYVVY LISEYRKVLE RLYELGARKV LVTGTGPLGC VPAELALHSR NGECAVELQR 420 AASLFNPQLV DMINSLNSQF GSDAFVAANA YEMNMDFVSD PQAYGFVTSK IACCGQGPYN 480 GIGLCTIASN LCPNRDLYAF WDPFHPSEKA NRIIVQKIFT GSNKYMNPMN LSTILALDTK 540 T

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MERSDSVGVA IGKRAGRSEW RIRLGMQKVC SLRVQFAAVN VVRVGGSDVR VVNGPLWTDF  60
TFKGYQVEMQ GDALVVINAL QKDTAALGNG QFGNILQDAS HMLKSFLRLK ATFGPGQTNK  120
RTWGKWVAEI RDPNRGARLW LGTFNTSTEA ALAYDEAARK LYGSSTKLNL PDDHHPRSSS  180
LSSANSTSSI SLLAACAGRQ AEARAFFVFG DSLVDNGNND YLATTARADS YPYGIDYPTH  240
RPTGRFSNGL NIPDLISEQI GSEPTLPYLS PQLTGQNLLV GANFASAGIG ILNDTGIQFL  300
NIIRIYKQLE YFQQYQTRVS ALVGPEQAQR LVNEALILIT LGGNDFVNNY YLLPFSARSR  360
QFSLPDYVVY LISEYRKVLE RLYELGARKV LVTGTGPLGC VPAELALHSR NGECAVELQR  420
AASLFNPQLV DMINSLNSQF GSDAFVAANA YEMNMDFVSD PQAYGFVTSK IACCGQGPYN  480
GIGLCTIASN LCPNRDLYAF WDPFHPSEKA NRIIVQKIFT GSNKYMNPMN LSTILALDTK  540
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75490.1	7e-24	ERF family protein