PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017651.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 244aa    MW: 27898.8 Da    PI: 8.468
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017651.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.95.2e-2968453128
          NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                  a++kewyfF+kr +ky+++ r+nr+t sg+Wkatg dk+++s++ge     glkktLv+y+g+a kg+ktdW+mhe+rl
  PCP017651.1   6 AGDKEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIHSHGGEShacSGLKKTLVYYRGSAGKGSKTDWMMHEFRL 84 
                  4789**************************************955444559**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MCAETAGDKE WYFFCKRGRK YKNSIRPNRV TGSGFWKATG IDKPIHSHGG ESHACSGLKK  60
TLVYYRGSAG KGSKTDWMMH EFRLPNSSSS NEHNNRSSNP KNMNTDPQQE AEIWTLCRIF  120
KRNVSYRKYT PDWRDLSADK RHPTDTVNSK KFVTDRQDLL DQSNTYISFG ASDSCYEGKP  180
LVNHTNNINS IINGSHQLHA HAVGQLSSNI QQPNSTHPYM DTFSNISFQD LENDLLNENW  240
DELI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.17e-60NAC family protein