PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017761.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Nin-like
Protein Properties Length: 332aa    MW: 38056.6 Da    PI: 9.9519
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017761.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.45.1e-27205254352
       RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl
  PCP017761.1 205 ANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSL 254
                  79**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDSCDCDCDP HLLRSLLVFK NTINHELIRS LHVYGLDEGK RNEVEREFVF RENGLYAELP  60
AEPLLRLMKF PASQVLQGHV NGCWACILAF HENSPPDFTC IPSILSVSRN PKLKTIPRLS  120
NDLQIIFELS CTTDDKKSLQ RSQQETSQVS NDSHHKSRRS PILDLDLNSL PSSITMSESS  180
KDQESGRSSP GITEKKKRAP SGRIANIALS DLAKYFDLPI VEASRNLNVG LTVLKKKCRE  240
FGIPRWPHRK IKSLDSLIRD LQEETEIQQK ENKAAALAVL KRQRMLVRER ESIERRPFLE  300
MKTETKRFRQ DVFKRRHRAR ALRSQGLSTS SN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-85Nin-like family protein