PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017854.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 327aa    MW: 36379.5 Da    PI: 4.8565
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017854.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1855103355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g
  PCP017854.1  55 FLGVRRRP-WGRYAAEIRDPNT---KERHWLGTFDTAEEAALAYDRAALSMKG 103
                  56******.**********933...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MSMSTSQALE KPFEAFEQGQ AQVGIAAVLQ RSTLTPSSQS GERRGRRKQA EPGRFLGVRR  60
RPWGRYAAEI RDPNTKERHW LGTFDTAEEA ALAYDRAALS MKGSQARTNF IYSDNTTFHS  120
LLSPFDVQTL LPQQSQFFTT QTAKQQFTNQ NSPPHHSNTF QSDQTQFQNP NNIRSSSSAH  180
HEDDECFFFS GNSSNSNSGY LACIVPDSCL RPPSDNDDPQ NYTNSKALNI DQNCSFANPN  240
NSTSATLPLD VMNVQADLET PNNNNNGDHQ ISCSDGFSYG FWDNQQPWEF NPMMTEDGCM  300
GALYPIVENS SAYGSSSSFS CFGHSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-38ERF family protein